Toggle navigation
LMDB
Browse
Metabolites
Biofluids
Classes
Search
ChemQuery Structure Search
Molecular Weight Search
Text Query
Advanced Search
LC-MS Search
LC-MS/MS Search
GC-MS Search
1D NMR Search
2D NMR Search
Downloads
About
About the Livestock Metabolome Database
Citing the LMDB
Statistics
Data Sources
Other Databases
Wishart Research Group
Contact Us
metabolites
Search
Quantitative metabolomics services for biomarker discovery and validation.
Specializing in ready to use metabolomics kits.
Your source for quantitative metabolomics technologies and bioinformatics.
Showing structure for LMDB00632 (4b-Hydroxycholesterol)
3247060 -OEChem-03252319313D 75 78 0 1 0 0 0 0 0999 V2000 6.2085 0.5621 -0.6603 O 0 0 0 0 0 0 0 0 0 0 0 0 7.1908 -1.8753 0.3421 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.0328 1.0962 0.2623 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.3249 0.4740 -0.9573 C 0 0 2 0 0 0 0 0 0 0 0 0 1.2012 0.5984 -0.9022 C 0 0 1 0 0 0 0 0 0 0 0 0 1.7343 -0.0739 0.3962 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.5040 0.8509 -0.1527 C 0 0 2 0 0 0 0 0 0 0 0 0 -0.5773 0.3181 1.5045 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3076 0.0706 0.5169 C 0 0 2 0 0 0 0 0 0 0 0 0 -1.0673 1.0688 -2.1500 C 0 0 0 0 0 0 0 0 0 0 0 0 0.9520 0.3626 1.6664 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.5217 1.1967 -1.6603 C 0 0 0 0 0 0 0 0 0 0 0 0 1.8418 -0.0524 -2.1368 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.5682 1.5976 0.6387 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.7505 2.6072 0.4520 C 0 0 0 0 0 0 0 0 0 0 0 0 3.9798 -0.2941 -0.8210 C 0 0 0 0 0 0 0 0 0 0 0 0 3.7986 -0.8943 1.6379 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2980 -0.3516 -1.9795 C 0 0 0 0 0 0 0 0 0 0 0 0 3.7039 1.5199 0.8905 C 0 0 0 0 0 0 0 0 0 0 0 0 5.4559 -0.6394 -0.8165 C 0 0 2 0 0 0 0 0 0 0 0 0 5.3082 -1.1307 1.6570 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.0012 1.2732 0.1671 C 0 0 0 0 0 0 0 0 0 0 0 0 5.7885 -1.6318 0.2999 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.4413 1.2674 2.1314 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4027 -0.2074 0.2040 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.8078 -0.4734 -0.3455 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.2373 -1.9500 -0.2422 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.1898 -2.4763 1.1932 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.3422 -2.8130 -1.1357 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.5490 -0.6063 -0.9690 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4773 1.6587 -0.9062 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5223 -1.1503 0.2853 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.6828 -0.2292 -0.0622 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.8929 -0.7308 1.4348 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.9946 0.7098 2.4322 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.0006 0.4282 -3.0353 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.6679 2.0523 -2.4216 H 0 0 0 0 0 0 0 0 0 0 0 0 1.2333 1.3764 1.9637 H 0 0 0 0 0 0 0 0 0 0 0 0 1.2214 -0.2884 2.5059 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8836 2.2138 -1.8490 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.1776 0.5086 -2.2051 H 0 0 0 0 0 0 0 0 0 0 0 0 1.7089 0.6101 -3.0006 H 0 0 0 0 0 0 0 0 0 0 0 0 1.3346 -0.9942 -2.3814 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4426 2.6812 0.5211 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.1379 3.2102 -0.3754 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2040 2.9911 1.3706 H 0 0 0 0 0 0 0 0 0 0 0 0 0.3179 2.8284 0.5234 H 0 0 0 0 0 0 0 0 0 0 0 0 3.3094 -1.8709 1.5204 H 0 0 0 0 0 0 0 0 0 0 0 0 3.4985 -0.5176 2.6233 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8166 -0.6404 -2.8908 H 0 0 0 0 0 0 0 0 0 0 0 0 3.3629 2.2424 0.1421 H 0 0 0 0 0 0 0 0 0 0 0 0 3.2918 1.8189 1.8589 H 0 0 0 0 0 0 0 0 0 0 0 0 4.7861 1.6467 0.9845 H 0 0 0 0 0 0 0 0 0 0 0 0 5.7767 -1.0755 -1.7704 H 0 0 0 0 0 0 0 0 0 0 0 0 5.8440 -0.2187 1.9457 H 0 0 0 0 0 0 0 0 0 0 0 0 5.5567 -1.8696 2.4290 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.7150 1.8469 0.7729 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.1273 1.6418 -0.8588 H 0 0 0 0 0 0 0 0 0 0 0 0 5.3074 -2.5938 0.0841 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.2717 0.2014 2.3128 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.3624 1.5380 2.6621 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.6592 1.8579 2.6121 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.6884 -0.7886 -0.3838 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3335 -0.5544 1.2392 H 0 0 0 0 0 0 0 0 0 0 0 0 5.9846 1.1505 -1.4017 H 0 0 0 0 0 0 0 0 0 0 0 0 7.6332 -1.0243 0.5031 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.8608 -0.1467 -1.3915 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.5285 0.1405 0.2095 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.2690 -2.0250 -0.6077 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.1668 -2.5779 1.5684 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6525 -3.4682 1.2460 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.7430 -1.8161 1.8690 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3174 -2.8840 -0.7583 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.7375 -3.8336 -1.1896 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.3081 -2.4194 -2.1570 H 0 0 0 0 0 0 0 0 0 0 0 0 1 20 1 0 0 0 0 1 65 1 0 0 0 0 2 23 1 0 0 0 0 2 66 1 0 0 0 0 3 4 1 0 0 0 0 3 7 1 0 0 0 0 3 8 1 0 0 0 0 3 15 1 0 0 0 0 4 5 1 0 0 0 0 4 10 1 0 0 0 0 4 30 1 0 0 0 0 5 6 1 0 0 0 0 5 13 1 0 0 0 0 5 31 1 0 0 0 0 6 9 1 0 0 0 0 6 11 1 0 0 0 0 6 32 1 0 0 0 0 7 12 1 0 0 0 0 7 14 1 0 0 0 0 7 33 1 0 0 0 0 8 11 1 0 0 0 0 8 34 1 0 0 0 0 8 35 1 0 0 0 0 9 16 1 0 0 0 0 9 17 1 0 0 0 0 9 19 1 0 0 0 0 10 12 1 0 0 0 0 10 36 1 0 0 0 0 10 37 1 0 0 0 0 11 38 1 0 0 0 0 11 39 1 0 0 0 0 12 40 1 0 0 0 0 12 41 1 0 0 0 0 13 18 1 0 0 0 0 13 42 1 0 0 0 0 13 43 1 0 0 0 0 14 22 1 0 0 0 0 14 24 1 0 0 0 0 14 44 1 0 0 0 0 15 45 1 0 0 0 0 15 46 1 0 0 0 0 15 47 1 0 0 0 0 16 18 2 0 0 0 0 16 20 1 0 0 0 0 17 21 1 0 0 0 0 17 48 1 0 0 0 0 17 49 1 0 0 0 0 18 50 1 0 0 0 0 19 51 1 0 0 0 0 19 52 1 0 0 0 0 19 53 1 0 0 0 0 20 23 1 0 0 0 0 20 54 1 0 0 0 0 21 23 1 0 0 0 0 21 55 1 0 0 0 0 21 56 1 0 0 0 0 22 25 1 0 0 0 0 22 57 1 0 0 0 0 22 58 1 0 0 0 0 23 59 1 0 0 0 0 24 60 1 0 0 0 0 24 61 1 0 0 0 0 24 62 1 0 0 0 0 25 26 1 0 0 0 0 25 63 1 0 0 0 0 25 64 1 0 0 0 0 26 27 1 0 0 0 0 26 67 1 0 0 0 0 26 68 1 0 0 0 0 27 28 1 0 0 0 0 27 29 1 0 0 0 0 27 69 1 0 0 0 0 28 70 1 0 0 0 0 28 71 1 0 0 0 0 28 72 1 0 0 0 0 29 73 1 0 0 0 0 29 74 1 0 0 0 0 29 75 1 0 0 0 0 M END > <PUBCHEM_COMPOUND_CID> 3247060 > <PUBCHEM_CONFORMER_RMSD> 0.8 > <PUBCHEM_CONFORMER_DIVERSEORDER> 1 2 3 > <PUBCHEM_MMFF94_PARTIAL_CHARGES> 11 1 -0.68 13 0.14 16 -0.28 18 -0.29 2 -0.68 20 0.42 23 0.28 50 0.15 65 0.4 66 0.4 9 0.14 > <PUBCHEM_EFFECTIVE_ROTOR_COUNT> 7 > <PUBCHEM_PHARMACOPHORE_FEATURES> 11 1 1 acceptor 1 1 donor 1 2 acceptor 1 2 donor 1 24 hydrophobe 3 27 28 29 hydrophobe 5 14 22 25 26 27 hydrophobe 5 3 4 7 10 12 rings 6 3 4 5 6 8 11 rings 6 5 6 9 13 16 18 rings 6 9 16 17 20 21 23 rings > <PUBCHEM_HEAVY_ATOM_COUNT> 29 > <PUBCHEM_ATOM_DEF_STEREO_COUNT> 9 > <PUBCHEM_ATOM_UDEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_DEF_STEREO_COUNT> 0 > <PUBCHEM_BOND_UDEF_STEREO_COUNT> 0 > <PUBCHEM_ISOTOPIC_ATOM_COUNT> 0 > <PUBCHEM_COMPONENT_COUNT> 1 > <PUBCHEM_CACTVS_TAUTO_COUNT> 1 > <PUBCHEM_CONFORMER_ID> 00318BD400000001 > <PUBCHEM_MMFF94_ENERGY> 88.3977 > <PUBCHEM_FEATURE_SELFOVERLAP> 55.926 > <PUBCHEM_SHAPE_FINGERPRINT> 10 15 16845564322952957986 10554248 39 10954000625119670897 10693767 8 16805592638767155370 11135926 11 15864354610635265353 11456790 92 12679459764471042590 11646440 116 15410894054803347594 12011746 2 14779556655914804620 12035758 1 16558745719768344143 12166972 35 18113901567475731693 12236239 1 18040720229519855164 12596602 18 18341892982833066801 12838862 33 15647055993566434598 13782708 43 18411980239186060491 14068700 675 18113898243055006501 14251764 18 12823284711504376337 14251764 30 18342735217656613147 14849402 71 13470106545553201755 14931854 50 14201683009821316882 15183329 4 14562522977950825277 15188451 53 18413386549550422007 15196674 1 15482371098591929260 15238133 3 10519982660260638543 17349148 13 17604439491891551216 18222031 100 16877940533802312740 18608769 82 17275384339184124934 19958102 18 14779543452821301147 20028762 73 18113897143575293810 20105231 36 15913057521068691780 2026 5 17679298573471443314 20775438 99 17028812440639224995 21267235 1 16056606426423110812 21521239 73 16805603685406890707 21623969 137 16774081769433608623 21637258 2 18408882945411773853 21756936 100 11312052150399203709 21781051 124 17489597766387858542 2215653 11 15719114647337775176 22393880 68 14562820992625391345 23522609 53 18044403580641536740 23569914 152 14421742505194125555 23576562 1 14057585516689752939 2838139 119 12180112212483403079 3004659 81 14923953344447232604 3009799 131 14779264220054993141 3178227 256 16200432485473764258 3633792 109 16732984206372466725 3680242 22 15625933185121989350 392239 28 15554440812942917059 397830 11 17917136303947938329 4015057 19 16443358602201268029 4073 2 17488756575356836753 4340502 62 16272209686608147462 465052 167 18130786767680215208 5104073 3 15051148161036808534 5385378 56 13829860092608479885 59755656 215 14345791638981036103 6009941 240 17631735950894598081 6086070 43 18114171995870786981 999808 66 17632579340457906375 > <PUBCHEM_SHAPE_MULTIPOLES> 585.07 18.73 2.24 1.99 11.66 0.72 -0.26 15.77 2.19 3.3 0.3 -0.63 -0.09 -0.64 > <PUBCHEM_SHAPE_SELFOVERLAP> 1214.17 > <PUBCHEM_SHAPE_VOLUME> 333.4 > <PUBCHEM_COORDINATE_TYPE> 2 5 10 $$$$
Download:
MOL
SDF
3D-SDF
PDB
SMILES
InChI
×
Structure for LMDB00632 (4b-Hydroxycholesterol)